Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCACTTCTGGGTGCCAGGTG
(((((((((.((..........&.)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025204
GeneSymbolTRABD
Binding site1303,1323
Score0.846
Seed1
Au0.265
Energy-17.4
Binding len14
Me-8.295
Phylopstem-0.5111346666666665
Phylopflank-0.6876228100000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure