Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCGCGGCAGCC
..((.((((((((((((....&)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330782
GeneSymbolPBX3
Binding site479,495
Score0.846
Seed0
Au0.382
Energy-24.2
Binding len16
Me-9.076
Phylopstem4.190242258333334
Phylopflank6.2428259499999985
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure