Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGGCCGTGACAGCTGCAC
.(((((((((((((((.....&)))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330782
GeneSymbolPBX3
Binding site1011,1030
Score0.923
Seed1
Au0.426
Energy-22.7
Binding len19
Me-3.793
Phylopstem5.224322767777778
Phylopflank5.821671037499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure