Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAAAGTGATGGGATTACAGGCGTGAGCTGCT
..(((((((((.((((((...&.)))))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025205
GeneSymbolMED28
Binding site9080,9117
Score0.923
Seed1
Au0.485
Energy-21.1
Binding len19
Me-8.304
Phylopstem0.37253050000000004
Phylopflank-0.022581906249999992
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure