Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAACTGGAGTTT
....((((.(((((((((((.&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025209
GeneSymbolEPC1
Binding site3623,3640
Score0.846
Seed0
Au0.647
Energy-21.7
Binding len17
Me-10.603
Phylopstem6.410576090909092
Phylopflank5.935841412500002
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure