Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGAGCATGACCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCAGG
((((((((((((((((.((((&.))))))))))..................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025213
GeneSymbolSPTBN4
Binding site1786,1838
Score0.846
Seed1
Au0.309
Energy-26.0
Binding len40
Me-3.938
Phylopstem3.6384023205882356
Phylopflank2.484078415
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end7
PositionCDS
2D Structure