Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCCAGCGGCCCTTCGTAGCTGCAAG
((((((((((((((((..(((&)))..))))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025215
GeneSymbolPUS1
Binding site2984,3010
Score0.923
Seed1
Au0.412
Energy-23.2
Binding len26
Me-3.938
Phylopstem-0.8642451600000001
Phylopflank-0.4724669825000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure