Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCGGGCCCTTTCACGGCAGCTGCT
..((((((((.(.((.((((.&.)))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025219
GeneSymbolDNAJC5
Binding site3782,3811
Score0.846
Seed1
Au0.397
Energy-23.7
Binding len19
Me-9.304
Phylopstem-0.49128674250000004
Phylopflank-0.37763012475
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure