Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGAGCCAGCAGCTGCC
..((((((((((((.(..(((&)))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025228
GeneSymbolTRAF3IP3
Binding site1953,1972
Score0.821
Seed1
Au0.382
Energy-22.7
Binding len19
Me-5.692
Phylopstem0.8311317384615384
Phylopflank1.5332250724999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure