Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCAACTGCAGGCCAAGATTGAATGCCTGCAAG
((((((((((((((((..(((&))).))))))))))...............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025228
GeneSymbolTRAF3IP3
Binding site1527,1563
Score0.923
Seed1
Au0.441
Energy-22.2
Binding len36
Me-3.938
Phylopstem1.2692460354838715
Phylopflank1.0407635537500002
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure