Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTGACCAGAGTACAGCAGTTGCAGG
(((((((((((((((..(((.&)))..)))))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025228
GeneSymbolTRAF3IP3
Binding site1639,1668
Score0.923
Seed1
Au0.544
Energy-20.9
Binding len29
Me-4.171
Phylopstem1.4277917260869568
Phylopflank1.38212841625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure