Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTCTTTTGCCGGGTA
((((((((......((((....&)))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025235
GeneSymbolTNKS2
Binding site3550,3568
Score0.846
Seed1
Au0.5
Energy-17.9
Binding len18
Me-14.554
Phylopstem5.246838875
Phylopflank6.021340326249998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure