Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCCTTAAAAAATATGATATGCCAGA
..((((((((..((((......&.))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025238
GeneSymbolBTBD1
Binding site2994,3022
Score0.923
Seed1
Au0.647
Energy-15.3
Binding len16
Me-11.129
Phylopstem1.199913375
Phylopflank1.0143035299999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure