Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACTCGGGCCTGCCGCAGCTGGGGA
((.((((((((((....((((&.)))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025238
GeneSymbolBTBD1
Binding site104,133
Score0.846
Seed0
Au0.235
Energy-24.7
Binding len19
Me-7.32
Phylopstem0.10756507000000001
Phylopflank-0.0234944125
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure