Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGAGGCACAAGGAACAGCTGCTGGCTGCGGA
((((((((((((((((.....&.)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025241
GeneSymbolUBXN6
Binding site851,888
Score0.923
Seed1
Au0.309
Energy-23.6
Binding len19
Me-3.938
Phylopstem4.2276263117647055
Phylopflank3.002905472500001
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure