Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCACATGAGGCCAGGA
.((((((.....((((.(((((&)))))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025243
GeneSymbolSLC19A3
Binding site4426,4445
Score0.846
Seed1
Au0.441
Energy-17.4
Binding len19
Me-14.577
Phylopstem-0.665859
Phylopflank-0.6998183775000001
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure