Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCATCTATGGGCCAGGTG
(((((((.....(((((.....&)))))......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025243
GeneSymbolSLC19A3
Binding site2347,2366
Score0.846
Seed1
Au0.485
Energy-16.4
Binding len19
Me-14.722
Phylopstem-0.42649414285714293
Phylopflank0.02605727499999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure