Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCACCTCACCGCCCTGGTGGACTGCCGCAGCCTGCAT
.(((((((((((((((.((((&))))))).......................)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025250
GeneSymbolTTYH3
Binding site1236,1280
Score0.923
Seed1
Au0.338
Energy-23.4
Binding len44
Me-3.793
Phylopstem4.285570356410257
Phylopflank3.5435294524999996
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure