Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCCAGGTG
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_025259
GeneSymbolMSH5
Binding site1648,1658
Score0.846
Seed1
Au0.412
Energy-16.2
Binding len10
Me-14.466
Phylopstem4.7943838888888894
Phylopflank3.7833438374999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure