Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCGCAAGCTGGGTCTGACATATAACACCACCTGCTGCAAC
(((((((((((((((......&))))))))...........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025261
GeneSymbolLY6G6C
Binding site303,346
Score0.923
Seed1
Au0.426
Energy-20.4
Binding len43
Me-4.171
Phylopstem0.01710125714285714
Phylopflank-0.07683125124999998
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end2
PositionCDS
2D Structure