Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTTCGTAATGCGAGAGGTGCGGGCGCGGCTGGCGGC
(((((((((((.(((((....&.))))).)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025264
GeneSymbolTHUMPD2
Binding site99,138
Score0.923
Seed1
Au0.397
Energy-21.4
Binding len20
Me-7.284
Phylopstem0.4368873333333334
Phylopflank0.11538827000000001
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure