Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGAGGTGCACAGC
..(((((((.((((((((....&))))))))..)))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_030568
GeneSymbolKHDC1
Binding site570,589
Score0.923
Seed1
Au0.485
Energy-18.2
Binding len19
Me-6.2
Phylopstem-0.23847549999999995
Phylopflank0.1999828595
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure