Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCGCGGCCGCGGCGCGAG
((((.(((((((((((.((((&))))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030568
GeneSymbolKHDC1
Binding site16,39
Score0.846
Seed0
Au0.191
Energy-27.5
Binding len23
Me-8.057
Phylopstem-0.26710410909090904
Phylopflank-0.35190234403846155
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure