Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCGTCTTCCCAACCTCAGCTGCC
..(((((((.(((((.(((((&))))).........))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030569
GeneSymbolITIH5
Binding site4453,4481
Score1.0
Seed1
Au0.485
Energy-22.5
Binding len28
Me-6.433
Phylopstem2.776283142857143
Phylopflank4.264429789999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure