Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTGCGGCCCCAGCAGCTGTC
..(((((((((((((((..((&)).)))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030569
GeneSymbolITIH5
Binding site597,619
Score0.949
Seed1
Au0.353
Energy-21.7
Binding len22
Me-4.957
Phylopstem-0.6178609944444445
Phylopflank-0.14883904450000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure