Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AACTCCAGCTGCGC
.((((((((.((((.......&)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030572
GeneSymbolSPX
Binding site243,257
Score1.0
Seed1
Au0.485
Energy-16.9
Binding len14
Me-6.004
Phylopstem0.6649074000000001
Phylopflank2.1062862575
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure