Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCGCAGCTGCT
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030578
GeneSymbolB9D2
Binding site552,600
Score0.923
Seed1
Au0.324
Energy-24.7
Binding len14
Me-5.925
Phylopstem3.6529845000000005
Phylopflank3.612736688749999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure