Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGGAAGACTAGCTGCTGCTGCTGCTGCTGCTGCAAA
(((((((.(((((.(((.(((&.)))..))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030579
GeneSymbolCYB5B
Binding site3181,3221
Score0.923
Seed1
Au0.456
Energy-23.3
Binding len24
Me-7.108
Phylopstem-0.14090107142857142
Phylopflank0.04459697625000009
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure