Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAGCCTGGCTGGCAGCTGCT
..((((((((((((((..(((&)))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030587
GeneSymbolB4GALT2
Binding site1331,1355
Score0.846
Seed1
Au0.353
Energy-23.7
Binding len24
Me-4.957
Phylopstem1.25535356
Phylopflank0.54794649375
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end6
Position3UTR
2D Structure