Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCGGCTTCGCTCTGCAGCTGCAT
.((((((((((((((..((((&))))..))))).......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030592
GeneSymbolMATN4
Binding site73,101
Score0.846
Seed1
Au0.353
Energy-25.6
Binding len28
Me-4.026
Phylopstem0.12350400952380944
Phylopflank0.061914449999999954
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure