Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTGAACGACCTATTTGGTGGAGTGGTGTATGCCGGGA
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_030594
GeneSymbolCPEB1
Binding site1509,1549
Score0.846
Seed1
Au0.544
Energy-19.6
Binding len13
Me-6.908
Phylopstem6.916419090909091
Phylopflank5.15245319875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure