Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCATAGAGAGAGAGGCCAGGCTGCACCGACAAGCTGCAGCTGTGAA
((((((((((((((....(((&.)))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030594
GeneSymbolCPEB1
Binding site994,1046
Score1.0
Seed1
Au0.382
Energy-25.8
Binding len23
Me-4.906
Phylopstem3.477439571428571
Phylopflank2.9014663349999994
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure