Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAACCCCTCAGCATGGCAGGCCTGCAGC
(((((((((((((((((((((&)))))))))))..........))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030621
GeneSymbolDICER1
Binding site304,338
Score0.846
Seed1
Au0.382
Energy-23.7
Binding len34
Me-3.938
Phylopstem1.2061653212121213
Phylopflank0.7628658125000001
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end8
PositionCDS
2D Structure