Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTTCAACATTCCCCCAGCCTTCCAGCTGCAAG
(((((((((.(((((...((.&.)).)))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030622
GeneSymbolCYP2S1
Binding site1484,1520
Score0.923
Seed1
Au0.412
Energy-22.6
Binding len22
Me-5.413
Phylopstem-0.27064559999999993
Phylopflank0.13858718375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure