Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTTGGAACCGCAGCAGGGCAGA
((((.(((((((((.(((((.&))))).)))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030623
GeneSymbolSPHKAP
Binding site150,173
Score0.846
Seed0
Au0.368
Energy-23.6
Binding len23
Me-8.792
Phylopstem3.494766788888889
Phylopflank1.26130121375
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure