Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGGGAAGACTCAGTGGTGCCAATGCAGCTGCTGCTGA
...((((.(((((((((.(((&.)))..))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030625
GeneSymbolTET1
Binding site6176,6218
Score0.846
Seed0
Au0.426
Energy-22.5
Binding len21
Me-8.828
Phylopstem0.6746935411111112
Phylopflank1.126173290875
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure