Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGGGGCAGGTGCCTACCGCTTGCTGCAGT
(((((((.(((((....((((&.)))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030628
GeneSymbolINTS5
Binding site1244,1278
Score0.923
Seed1
Au0.353
Energy-22.5
Binding len20
Me-8.077
Phylopstem2.292168557142857
Phylopflank2.51501671875
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure