Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATAGCCCGGCTGCT
..(((((((.(((((((....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030630
GeneSymbolHID1
Binding site1134,1149
Score0.923
Seed1
Au0.397
Energy-21.5
Binding len15
Me-6.2
Phylopstem3.8074884571428576
Phylopflank3.918174925
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure