Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGGTAATATTCTTACATCCAATGAGAGCGCTGCCTGCAT
.((((((.(((.((((((((.&)))))))........................).))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030631
GeneSymbolSLC25A21
Binding site2673,2718
Score0.846
Seed1
Au0.588
Energy-18.0
Binding len45
Me-9.454
Phylopstem0.2871659281249999
Phylopflank1.00352062
Longest consecutive pairings7
Position of longest consecutive pairings38
Pairings in 3prime end7
Position3UTR
2D Structure