Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAGCTGCAGCCAGCT
..((.(((((((((((.((((&)))))))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030640
GeneSymbolDUSP16
Binding site2852,2872
Score0.846
Seed0
Au0.426
Energy-25.0
Binding len20
Me-9.076
Phylopstem0.57245435
Phylopflank0.9157913818749999
Longest consecutive pairings15
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure