Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTATTGTGTGCCACAGAGGTA
(((((((((((((((.......&.))))))))))))....))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_030641
GeneSymbolAPOL6
Binding site7813,7837
Score1.0
Seed1
Au0.735
Energy-18.2
Binding len21
Me-4.171
Phylopstem0.0495354
Phylopflank0.017963786999999946
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end1
Position3UTR
2D Structure