Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGCAGCCGGTGTCTGACTTCCGGCAGCAGCTGCT
..(((((((((((((((.(((&))).)))))))..................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030653
GeneSymbolDDX11
Binding site2099,2137
Score0.846
Seed1
Au0.324
Energy-26.0
Binding len38
Me-4.957
Phylopstem4.935299639393939
Phylopflank3.9758107225000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure