Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGAGCCTGCTGCAGT
(((((((...((((.(.(((.&))).).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366541
GeneSymbolIRAG2
Binding site742,761
Score0.846
Seed1
Au0.471
Energy-18.6
Binding len19
Me-9.286
Phylopstem2.4365455714285713
Phylopflank1.6479775175000002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure