Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGATCATCCGCGAGCTGCAGG
((((((((((((.((...(((&)))....)).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030662
GeneSymbolMAP2K2
Binding site584,608
Score0.846
Seed1
Au0.382
Energy-23.6
Binding len24
Me-5.46
Phylopstem2.1743826153846153
Phylopflank3.4663268187500003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure