Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCCACAGCCGCAGCCACTACCTGCAGG
((((((((((((((((..(((&)))...))))))))))).......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030665
GeneSymbolRAI1
Binding site864,894
Score0.974
Seed1
Au0.412
Energy-25.1
Binding len30
Me-3.938
Phylopstem1.2111028521739131
Phylopflank2.4204962574999995
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure