Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCACTGGCTGCCAGGA
.(((((((..((..((.((((.&))))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_030667
GeneSymbolPTPRO
Binding site753,771
Score0.923
Seed1
Au0.647
Energy-16.1
Binding len18
Me-8.238
Phylopstem4.437062428571428
Phylopflank5.034027782375
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure