Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGAAGCCGCAGCACGTGAG
((((.(((((((((....(((&)))....)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030667
GeneSymbolPTPRO
Binding site1515,1538
Score0.846
Seed0
Au0.471
Energy-21.2
Binding len23
Me-9.025
Phylopstem3.864363444444445
Phylopflank4.123116652499999
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure