Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAATGAACTGCAGCATGCT
..((((((((((((.......&.))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030671
GeneSymbolPTPRO
Binding site3451,3471
Score1.0
Seed1
Au0.647
Energy-19.2
Binding len15
Me-5.925
Phylopstem0.4681041446153846
Phylopflank0.5542744870000001
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end1
Position3UTR
2D Structure