Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCGCAGGTGCAAA
(((((.((((.(((((.....&))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030674
GeneSymbolSLC38A1
Binding site6233,6249
Score0.923
Seed0
Au0.5
Energy-20.2
Binding len16
Me-8.663
Phylopstem2.4388292
Phylopflank3.0678916151249997
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end3
Position3UTR
2D Structure