Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACGCGCGCATCTACTGCCAGGTA
((((((((......((((((..&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_030760
GeneSymbolS1PR5
Binding site699,725
Score0.846
Seed1
Au0.309
Energy-18.9
Binding len16
Me-14.554
Phylopstem-0.131078275
Phylopflank-0.01578127250000002
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure